Tests and Coverage
31 August, 2020 11:07:45
Source:vignettes/tests_and_coverage.Rmd
tests_and_coverage.RmdThis output is created by covrpage.
Coverage
Coverage summary is created using the covr package.
| Object | Coverage (%) |
|---|---|
| shredder | 74.51 |
| R/rats_example.R | 0.00 |
| R/complete.R | 12.50 |
| R/zzz.R | 50.00 |
| R/stan_thin.R | 57.14 |
| R/utils.R | 66.67 |
| R/stan_names.R | 80.00 |
| R/stan_retain.R | 91.30 |
| R/stan_select.R | 92.31 |
| R/stan_slice.R | 93.94 |
| R/stan_filter.R | 96.23 |
| R/partials.R | 100.00 |
| R/stan_axe.R | 100.00 |
| R/stan_utils.R | 100.00 |
Unit Tests
Unit Test summary is created using the testthat package.
| file | n | time | error | failed | skipped | warning |
|---|---|---|---|---|---|---|
| test-axe.R | 2 | 0.016 | 0 | 0 | 0 | 0 |
| test-filter.R | 7 | 0.209 | 0 | 0 | 0 | 0 |
| test-names.R | 2 | 0.003 | 0 | 0 | 0 | 0 |
| test-retain.R | 6 | 0.376 | 0 | 0 | 0 | 0 |
| test-sampling.R | 7 | 0.257 | 0 | 0 | 0 | 0 |
| test-select.R | 15 | 0.368 | 0 | 0 | 0 | 0 |
| test-slice.R | 5 | 0.328 | 0 | 0 | 0 | 0 |
Show Detailed Test Results
| file | context | test | status | n | time |
|---|---|---|---|---|---|
| test-axe.R | axe | axe elements: no fit_instance | PASS | 1 | 0.015 |
| test-axe.R | axe | axe elements: no stanmodel | PASS | 1 | 0.001 |
| test-filter.R | filter | filters: default | PASS | 1 | 0.021 |
| test-filter.R | filter | filters: not permuted | PASS | 1 | 0.020 |
| test-filter.R | filter | filters: not permuted | PASS | 1 | 0.011 |
| test-filter.R | filter | filters: indexed name | PASS | 1 | 0.011 |
| test-filter.R | filter | filters: compound query | PASS | 1 | 0.009 |
| test-filter.R | filter | filters: no samples | PASS | 1 | 0.007 |
| test-filter.R | filter | filters: invalid pars | PASS | 1 | 0.130 |
| test-names.R | names | names: default | PASS | 1 | 0.002 |
| test-names.R | names | names: expand | PASS | 1 | 0.001 |
| test-retain.R | retain | retain: default | PASS | 1 | 0.003 |
| test-retain.R | retain | retain: null | PASS | 1 | 0.353 |
| test-retain.R | retain | retain: single | PASS | 1 | 0.002 |
| test-retain.R | retain | retain: multiple | PASS | 1 | 0.001 |
| test-retain.R | retain | retain: all | PASS | 1 | 0.001 |
| test-retain.R | retain | retain: bad | PASS | 1 | 0.016 |
| test-sampling.R | sampling | slice: default | PASS | 1 | 0.232 |
| test-sampling.R | sampling | slice: no warmup | PASS | 1 | 0.003 |
| test-sampling.R | sampling | slice: bad indexs | PASS | 2 | 0.008 |
| test-sampling.R | sampling | thinning: thin_n | PASS | 1 | 0.005 |
| test-sampling.R | sampling | thinning: thin_frac | PASS | 1 | 0.005 |
| test-sampling.R | sampling | thinning: no warmup | PASS | 1 | 0.004 |
| test-select.R | select | names: no pars | PASS | 1 | 0.003 |
| test-select.R | select | names: single par | PASS | 1 | 0.002 |
| test-select.R | select | names: multiple pars | PASS | 1 | 0.002 |
| test-select.R | select | names: par index | PASS | 1 | 0.002 |
| test-select.R | select | names: character par | PASS | 1 | 0.002 |
| test-select.R | select | names: character par syms | PASS | 1 | 0.003 |
| test-select.R | select | names: regex character pars | PASS | 1 | 0.003 |
| test-select.R | select | names: remove summary | PASS | 1 | 0.336 |
| test-select.R | select | partials: no pars | PASS | 1 | 0.002 |
| test-select.R | select | partials: starts_with | PASS | 1 | 0.002 |
| test-select.R | select | partials: ends_with | PASS | 1 | 0.002 |
| test-select.R | select | partials: starts_contains | PASS | 1 | 0.003 |
| test-select.R | select | partials: mixed | PASS | 1 | 0.002 |
| test-select.R | select | partials: par regex index | PASS | 1 | 0.002 |
| test-select.R | select | partials: par regex multiple index | PASS | 1 | 0.002 |
| test-slice.R | slice | slice: empty | PASS | 1 | 0.312 |
| test-slice.R | slice | slice: single | PASS | 1 | 0.004 |
| test-slice.R | slice | slice: single no warmup | PASS | 1 | 0.003 |
| test-slice.R | slice | slice: vector | PASS | 1 | 0.004 |
| test-slice.R | slice | slice: reset permut | PASS | 1 | 0.005 |
Session Info
| Field | Value | |
|---|---|---|
| Version | R version 4.0.2 (2020-06-22) | |
| Platform | x86_64-apple-darwin17.0 (64-bit) |  |
| Running | macOS Catalina 10.15.6 | |
| Language | en_US | |
| Timezone | UTC |
| Package | Version |
|---|---|
| testthat | 2.3.2 |
| covr | 3.3.2 |
| covrpage | 0.0.71 |